Chryseobacterium oryzae ADR-1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium oryzae ADR-1 is a rod-shaped bacterium known for its distinct genetic characteristics, including the presence of three replicons. The genetic material of this organism is cataloged under several accessions, specifically CP094529.1, CP094530.1, and CP094531.1. This bacterium is part of the Chryseobacterium genus, which is recognized for its diversity and adaptability in various environments. The rod shape of C. oryzae ADR-1 suggests it can exhibit versatile motility and potentially engage in different ecological niches, which is typical for rod-shaped bacteria. The presence of three replicons indicates a complex genomic structure that may contribute to its adaptability and resilience in various environments. This complexity can facilitate the acquisition of novel traits, possibly enhancing its survival in diverse ecological conditions. In an ecological context, the ability of C. oryzae ADR-1 to thrive in varied habitats may play a significant role in nutrient cycling and the biodegradation of organic matter. Such capabilities can be crucial for maintaining ecosystem balance. The traits of C. oryzae ADR-1 emphasize its potential significance in environmental microbiology, particularly in understanding bacterial roles in ecological processes and their interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium oryzae
StrainADR-1

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium oryzae ADR-1, Complete Genome

Gene Summary

Adenine Count

1032683 bp

Thymine Count

1031662 bp

Guanine Count

530154 bp

Cytosine Count

536764 bp

Genome Length

3131263 bp

Protein-coding Genes

2774 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamine--fructose-6-phosphate transaminase (isomerizing)MTP08_12310Q8AAB1Negative2711250 - 271310367914.7
duf4270 domain-containing proteinMTP08_12315Not AvailableNegative2713123 - 271469757923.6
glycogen/starch synthaseMTP08_12320B3EGV0Negative2714721 - 271549129685.2
pantoate--beta-alanine ligaseMTP08_12325A6GVV3Positive2715659 - 271650732865.2
Trna-lysNot AvailableNot AvailablePositive2716590 - 2716665Not Available
Trna-leuNot AvailableNot AvailablePositive2716742 - 2716824Not Available
Trna-lysNot AvailableNot AvailablePositive2716854 - 2716929Not Available
shikimate kinaseMTP08_12345A6GZJ6Positive2717047 - 271756219656.9
rna-binding s4 domain-containing proteinMTP08_12350P44754Negative2717567 - 271800116950.1
hypothetical proteinMTP08_12355Not AvailablePositive2718056 - 271880227656.4

Displaying genes 2461 – 2470 of 2942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.