Chryseobacterium oryzae ADR-1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium oryzae ADR-1 is a rod-shaped bacterium known for its distinct genetic characteristics, including the presence of three replicons. The genetic material of this organism is cataloged under several accessions, specifically CP094529.1, CP094530.1, and CP094531.1. This bacterium is part of the Chryseobacterium genus, which is recognized for its diversity and adaptability in various environments. The rod shape of C. oryzae ADR-1 suggests it can exhibit versatile motility and potentially engage in different ecological niches, which is typical for rod-shaped bacteria. The presence of three replicons indicates a complex genomic structure that may contribute to its adaptability and resilience in various environments. This complexity can facilitate the acquisition of novel traits, possibly enhancing its survival in diverse ecological conditions. In an ecological context, the ability of C. oryzae ADR-1 to thrive in varied habitats may play a significant role in nutrient cycling and the biodegradation of organic matter. Such capabilities can be crucial for maintaining ecosystem balance. The traits of C. oryzae ADR-1 emphasize its potential significance in environmental microbiology, particularly in understanding bacterial roles in ecological processes and their interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium oryzae
StrainADR-1

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium oryzae ADR-1, Complete Genome

Gene Summary

Adenine Count

1032683 bp

Thymine Count

1031662 bp

Guanine Count

530154 bp

Cytosine Count

536764 bp

Genome Length

3131263 bp

Protein-coding Genes

2774 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinMTP08_06660Not AvailableNegative1431451 - 143262639566.7
hypothetical proteinMTP08_06665Not AvailablePositive1432982 - 143328111501.8
sdr family oxidoreductaseMTP08_06670P58380Positive1433402 - 143421129579.1
excinuclease abc subunit uvraMTP08_06675Q8XNI5Negative1434275 - 1437103105420.0
branched-chain amino acid aminotransferaseMTP08_06680Q5HIC1Negative1437294 - 143836440023.9
trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmdMTP08_06685A1V8X2Positive1438450 - 143912426073.2
nudix domain-containing proteinMTP08_06690M4I1C6Positive1439192 - 143960816279.6
duf4294 domain-containing proteinMTP08_06695Not AvailableNegative1439628 - 144033227957.5
m42 family metallopeptidaseMTP08_06700P94521Positive1440386 - 144146240269.3
ribulose-phosphate 3-epimeraseMTP08_06705O34557Positive1441493 - 144214323851.8

Displaying genes 1331 – 1340 of 2942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.