Spirosoma oryzicola RHs26

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cytophagaceae

Genus

Spirosoma

Description

Spirosoma oryzicola RHs26 is a bacterial species notable for its possession of flagella, which suggests it has the capability for motility. This trait is significant as it may influence its ecological interactions and colonization abilities in various environments. The genomic structure of S. oryzicola RHs26 is characterized by the presence of 10 replicons, indicating a complex genetic architecture that may contribute to its adaptability and metabolic diversity. This complexity can be advantageous in fluctuating environments, allowing the organism to respond to various ecological pressures. The sequence data for S. oryzicola RHs26 is available through several accessions, including CP089538.1 to CP089547.1. These accessions provide a comprehensive genetic framework to study the organism further, potentially aiding in understanding its phylogenetic relationships and functional characteristics. In summary, Spirosoma oryzicola RHs26 exhibits motility through flagella and possesses a unique genomic structure with 10 replicons. These features may offer insights into its ecological roles, such as its ability to thrive in diverse habitats and interact with other microorganisms in its environment. The availability of its genomic data opens avenues for further research into the ecological and biological implications of its traits.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCytophagaceae
GenusSpirosoma
SpeciesSpirosoma oryzicola
StrainRHs26

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1431302 bp

Thymine Count

1434028 bp

Guanine Count

1425264 bp

Cytosine Count

1422474 bp

Genome Length

5713068 bp

Protein-coding Genes

4767 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulatorLQ777_04810Q55169Positive1196478 - 119691817026.5
pas domain s-box proteinLQ777_04815Q06067Positive1197002 - 119847755728.6
nudix domain-containing proteinLQ777_04820Q58549Negative1198525 - 119926228222.8
carboxylesterase family proteinLQ777_04825D2D3B6Positive1199421 - 120104958654.7
tonb-dependent receptorLQ777_04830Not AvailablePositive1201462 - 120386187080.1
duf4249 domain-containing proteinLQ777_04835Not AvailablePositive1203897 - 120479032412.8
capsule assembly wzi family proteinLQ777_04840Not AvailablePositive1204930 - 120642655327.7
endo-1,4-beta-xylanaseLQ777_04845P10474Negative1206434 - 120749540417.4
wecb/taga/cpsf family glycosyltransferaseLQ777_04850P27620Negative1207526 - 120829628893.4
(d)cmp kinaseLQ777_04855Q11YY6Negative1208430 - 120917927969.5

Displaying genes 961 – 970 of 6094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.