Spirosoma oryzicola RHs26

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cytophagaceae

Genus

Spirosoma

Description

Spirosoma oryzicola RHs26 is a bacterial species notable for its possession of flagella, which suggests it has the capability for motility. This trait is significant as it may influence its ecological interactions and colonization abilities in various environments. The genomic structure of S. oryzicola RHs26 is characterized by the presence of 10 replicons, indicating a complex genetic architecture that may contribute to its adaptability and metabolic diversity. This complexity can be advantageous in fluctuating environments, allowing the organism to respond to various ecological pressures. The sequence data for S. oryzicola RHs26 is available through several accessions, including CP089538.1 to CP089547.1. These accessions provide a comprehensive genetic framework to study the organism further, potentially aiding in understanding its phylogenetic relationships and functional characteristics. In summary, Spirosoma oryzicola RHs26 exhibits motility through flagella and possesses a unique genomic structure with 10 replicons. These features may offer insights into its ecological roles, such as its ability to thrive in diverse habitats and interact with other microorganisms in its environment. The availability of its genomic data opens avenues for further research into the ecological and biological implications of its traits.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCytophagaceae
GenusSpirosoma
SpeciesSpirosoma oryzicola
StrainRHs26

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1431302 bp

Thymine Count

1434028 bp

Guanine Count

1425264 bp

Cytosine Count

1422474 bp

Genome Length

5713068 bp

Protein-coding Genes

4767 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinLQ777_22110Q8A1G2Negative5232171 - 523365855630.6
tonb-dependent receptorLQ777_22115T2KPJ3Negative5233762 - 5236977115286.0
fad-binding proteinLQ777_22120P77748Positive5237467 - 5240436110074.0
duf11 domain-containing proteinLQ777_22125D1ZSU8Positive5240713 - 524321787563.2
apc family permeaseLQ777_22130O34739Negative5243222 - 524461350231.7
tonb-dependent receptorLQ777_22135Q8A1G1Negative5244815 - 5247832108547.0
gfo/idh/moca family oxidoreductaseLQ777_22140O68965Positive5248106 - 524945849826.2
hypothetical proteinLQ777_22145Not AvailablePositive5249588 - 52497917658.85
dna-binding proteinLQ777_22150Not AvailablePositive5249939 - 525044818639.3
fad:protein fmn transferaseLQ777_22155O83774Negative5250471 - 525159241551.4

Displaying genes 4421 – 4430 of 6094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.