Spirosoma oryzicola RHs26

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cytophagaceae

Genus

Spirosoma

Description

Spirosoma oryzicola RHs26 is a bacterial species notable for its possession of flagella, which suggests it has the capability for motility. This trait is significant as it may influence its ecological interactions and colonization abilities in various environments. The genomic structure of S. oryzicola RHs26 is characterized by the presence of 10 replicons, indicating a complex genetic architecture that may contribute to its adaptability and metabolic diversity. This complexity can be advantageous in fluctuating environments, allowing the organism to respond to various ecological pressures. The sequence data for S. oryzicola RHs26 is available through several accessions, including CP089538.1 to CP089547.1. These accessions provide a comprehensive genetic framework to study the organism further, potentially aiding in understanding its phylogenetic relationships and functional characteristics. In summary, Spirosoma oryzicola RHs26 exhibits motility through flagella and possesses a unique genomic structure with 10 replicons. These features may offer insights into its ecological roles, such as its ability to thrive in diverse habitats and interact with other microorganisms in its environment. The availability of its genomic data opens avenues for further research into the ecological and biological implications of its traits.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCytophagaceae
GenusSpirosoma
SpeciesSpirosoma oryzicola
StrainRHs26

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1431302 bp

Thymine Count

1434028 bp

Guanine Count

1425264 bp

Cytosine Count

1422474 bp

Genome Length

5713068 bp

Protein-coding Genes

4767 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l28LQ777_21960Q11XD1Positive5197900 - 51981398914.85
rlua family pseudouridine synthaseLQ777_21965Q89AH2Positive5198260 - 519898227196.8
dabb family proteinLQ777_21970Not AvailablePositive5199073 - 519937211414.3
ohr family peroxiredoxinLQ777_21975P70736Negative5199442 - 519985514813.1
tetratricopeptide repeat proteinLQ777_21980Not AvailablePositive5200240 - 520202165812.3
duf4292 domain-containing proteinLQ777_21985Not AvailablePositive5202071 - 520295533510.2
peptidoglycan dd-metalloendopeptidase family proteinLQ777_21990A0A0H3C9Q9Positive5203065 - 520439350328.0
3-methyl-2-oxobutanoate hydroxymethyltransferaseLQ777_21995Q11Q55Positive5204485 - 520530329448.6
rna pseudouridine synthaseLQ777_22000Q9KQH0Positive5205361 - 520610729165.2
port family proteinLQ777_22005Not AvailableNegative5206258 - 520695624705.0

Displaying genes 4391 – 4400 of 6094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.