Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26, Complete Genome
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l28 | LQ777_21960 | Q11XD1 | Positive | 5197900 - 5198139 | 8914.85 |
| rlua family pseudouridine synthase | LQ777_21965 | Q89AH2 | Positive | 5198260 - 5198982 | 27196.8 |
| dabb family protein | LQ777_21970 | Not Available | Positive | 5199073 - 5199372 | 11414.3 |
| ohr family peroxiredoxin | LQ777_21975 | P70736 | Negative | 5199442 - 5199855 | 14813.1 |
| tetratricopeptide repeat protein | LQ777_21980 | Not Available | Positive | 5200240 - 5202021 | 65812.3 |
| duf4292 domain-containing protein | LQ777_21985 | Not Available | Positive | 5202071 - 5202955 | 33510.2 |
| peptidoglycan dd-metalloendopeptidase family protein | LQ777_21990 | A0A0H3C9Q9 | Positive | 5203065 - 5204393 | 50328.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | LQ777_21995 | Q11Q55 | Positive | 5204485 - 5205303 | 29448.6 |
| rna pseudouridine synthase | LQ777_22000 | Q9KQH0 | Positive | 5205361 - 5206107 | 29165.2 |
| port family protein | LQ777_22005 | Not Available | Negative | 5206258 - 5206956 | 24705.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

