Spirosoma oryzicola RHs26

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cytophagaceae

Genus

Spirosoma

Description

Spirosoma oryzicola RHs26 is a bacterial species notable for its possession of flagella, which suggests it has the capability for motility. This trait is significant as it may influence its ecological interactions and colonization abilities in various environments. The genomic structure of S. oryzicola RHs26 is characterized by the presence of 10 replicons, indicating a complex genetic architecture that may contribute to its adaptability and metabolic diversity. This complexity can be advantageous in fluctuating environments, allowing the organism to respond to various ecological pressures. The sequence data for S. oryzicola RHs26 is available through several accessions, including CP089538.1 to CP089547.1. These accessions provide a comprehensive genetic framework to study the organism further, potentially aiding in understanding its phylogenetic relationships and functional characteristics. In summary, Spirosoma oryzicola RHs26 exhibits motility through flagella and possesses a unique genomic structure with 10 replicons. These features may offer insights into its ecological roles, such as its ability to thrive in diverse habitats and interact with other microorganisms in its environment. The availability of its genomic data opens avenues for further research into the ecological and biological implications of its traits.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCytophagaceae
GenusSpirosoma
SpeciesSpirosoma oryzicola
StrainRHs26

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1431302 bp

Thymine Count

1434028 bp

Guanine Count

1425264 bp

Cytosine Count

1422474 bp

Genome Length

5713068 bp

Protein-coding Genes

4767 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxymethylglutaryl-coa lyaseLQ777_19460O34873Negative4586161 - 458700630245.3
transmembrane 220 family proteinLQ777_19465Not AvailableNegative4587003 - 458735613019.3
tetratricopeptide repeat proteinLQ777_19470Not AvailableNegative4587517 - 458823626502.0
galactokinaseLQ777_19475Q8R8R7Positive4588507 - 458967342963.6
fructose-6-phosphate aldolaseLQ777_19480Q11S31Positive4589755 - 459042324107.3
atp-binding cassette domain-containing proteinLQ777_19485A5U7B7Positive4590500 - 459118025113.4
glycoside hydrolase family 26 proteinLQ777_19490P49424Positive4591341 - 459250744248.6
pdz domain-containing proteinLQ777_19495Not AvailablePositive4592676 - 459447267784.9
pglz domain-containing proteinLQ777_19500Q9F868Negative4594619 - 459618760976.8
lysm peptidoglycan-binding domain-containing proteinLQ777_19505P21171Positive4596529 - 459764440108.8

Displaying genes 3891 – 3900 of 6094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.