Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26, Complete Genome
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate binding family 9 domain-containing protein | LQ777_15805 | Not Available | Positive | 3727847 - 3730024 | 82662.1 |
| hypothetical protein | LQ777_15810 | Not Available | Positive | 3730120 - 3730308 | 6724.71 |
| 4-hydroxy-tetrahydrodipicolinate synthase | LQ777_15815 | Q11VI2 | Negative | 3730458 - 3731354 | 32255.2 |
| hypothetical protein | LQ777_15820 | Not Available | Positive | 3731478 - 3731984 | 18907.9 |
| nad-dependent dna ligase liga | LQ777_15825 | Q11VI1 | Negative | 3732000 - 3734045 | 75984.5 |
| ribulose-phosphate 3-epimerase | LQ777_15830 | O34557 | Positive | 3734307 - 3734978 | 24159.2 |
| alpha-glucosidase c-terminal domain-containing protein | LQ777_15835 | P14899 | Positive | 3735032 - 3736432 | 53201.4 |
| ompa family protein | LQ777_15840 | P37665 | Positive | 3736544 - 3738655 | 76682.5 |
| glycosyltransferase family 39 protein | LQ777_15845 | Not Available | Positive | 3738686 - 3740479 | 67384.0 |
| transketolase | LQ777_15850 | A6VKQ4 | Positive | 3740509 - 3741327 | 29275.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

