Spirosoma oryzicola RHs26

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cytophagaceae

Genus

Spirosoma

Description

Spirosoma oryzicola RHs26 is a bacterial species notable for its possession of flagella, which suggests it has the capability for motility. This trait is significant as it may influence its ecological interactions and colonization abilities in various environments. The genomic structure of S. oryzicola RHs26 is characterized by the presence of 10 replicons, indicating a complex genetic architecture that may contribute to its adaptability and metabolic diversity. This complexity can be advantageous in fluctuating environments, allowing the organism to respond to various ecological pressures. The sequence data for S. oryzicola RHs26 is available through several accessions, including CP089538.1 to CP089547.1. These accessions provide a comprehensive genetic framework to study the organism further, potentially aiding in understanding its phylogenetic relationships and functional characteristics. In summary, Spirosoma oryzicola RHs26 exhibits motility through flagella and possesses a unique genomic structure with 10 replicons. These features may offer insights into its ecological roles, such as its ability to thrive in diverse habitats and interact with other microorganisms in its environment. The availability of its genomic data opens avenues for further research into the ecological and biological implications of its traits.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCytophagaceae
GenusSpirosoma
SpeciesSpirosoma oryzicola
StrainRHs26

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1431302 bp

Thymine Count

1434028 bp

Guanine Count

1425264 bp

Cytosine Count

1422474 bp

Genome Length

5713068 bp

Protein-coding Genes

4767 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4345 domain-containing proteinLQ777_15705Not AvailablePositive3700796 - 370120614876.6
multidrug efflux rnd transporter permease subunitLQ777_15710Q8G2M6Negative3701282 - 3704521117432.0
efflux rnd transporter periplasmic adaptor subunitLQ777_15715P0AE07Negative3704600 - 370576341442.2
tolc family proteinLQ777_15720P02930Negative3705892 - 370723850158.1
glutamine--trna ligase/yqey domain fusion proteinLQ777_15725Q89KR6Positive3707423 - 370915066037.9
nuclear transport factor 2 family proteinLQ777_15730Not AvailableNegative3709296 - 370979618189.7
m14 family metallopeptidaseLQ777_15735B8XGR2Negative3709803 - 371144662769.4
m20/m25/m40 family metallo-hydrolaseLQ777_15740O34984Positive3711773 - 371310447280.7
sdr family oxidoreductaseLQ777_15745P16542Negative3713205 - 371423036841.1
type 1 glutamine amidotransferaseLQ777_15750O06006Positive3714377 - 371494620560.2

Displaying genes 3141 – 3150 of 6094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.