Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26, Complete Genome
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family dna-binding domain-containing protein | LQ777_13405 | Q81JL3 | Negative | 3149251 - 3149943 | 26610.4 |
| pas domain s-box protein | LQ777_13410 | P58363 | Negative | 3149947 - 3152793 | 107933.0 |
| heme no-binding domain-containing protein | LQ777_13415 | Not Available | Negative | 3152790 - 3153329 | 20664.6 |
| sigma-70 family rna polymerase sigma factor | LQ777_13420 | Q45585 | Positive | 3153566 - 3154141 | 22644.9 |
| membrane dipeptidase | LQ777_13425 | P27509 | Negative | 3154204 - 3155274 | 39929.3 |
| d-ta family plp-dependent enzyme | LQ777_13430 | O82872 | Negative | 3155455 - 3156570 | 40711.2 |
| rida family protein | LQ777_13435 | O96876 | Negative | 3156570 - 3157049 | 17104.9 |
| amidohydrolase/deacetylase family metallohydrolase | LQ777_13440 | A6X391 | Negative | 3157297 - 3158574 | 46413.3 |
| aminotransferase class v-fold plp-dependent enzyme | LQ777_13445 | Q98FF1 | Negative | 3158648 - 3159871 | 44176.0 |
| rida family protein | LQ777_13450 | Q9UZA3 | Negative | 3159903 - 3160391 | 17504.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

