Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter mucosus |
| Strain | Q8-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1589417 bp
Thymine Count
1590349 bp
Guanine Count
873842 bp
Cytosine Count
875421 bp
Genome Length
4929029 bp
Protein-coding Genes
4085 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2334 domain-containing protein | LOK61_04055 | Not Available | Positive | 954960 - 955691 | 27740.4 |
| laci family transcriptional regulator | LOK61_04060 | Q9K6K2 | Positive | 955902 - 956924 | 37699.6 |
| sodium:proton antiporter | LOK61_04065 | G3XD29 | Negative | 957095 - 958345 | 45116.3 |
| mechanosensitive ion channel family protein | LOK61_04070 | Q89AB5 | Negative | 958389 - 960161 | 66894.4 |
| hypothetical protein | LOK61_04075 | Not Available | Positive | 960605 - 961276 | 25331.1 |
| duf92 domain-containing protein | LOK61_04080 | P73555 | Positive | 961439 - 962152 | 25381.0 |
| rna polymerase sigma-70 factor | LOK61_04085 | Not Available | Negative | 962409 - 962993 | 22836.7 |
| fecr domain-containing protein | LOK61_04090 | Not Available | Positive | 963174 - 964331 | 43035.4 |
| tonb-dependent receptor | LOK61_04095 | T2KPJ3 | Positive | 964515 - 967979 | 125035.0 |
| ragb/susd family nutrient uptake outer membrane protein | LOK61_04100 | T2KNB8 | Positive | 968002 - 969435 | 52430.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

