Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter mucosus |
| Strain | Q8-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1589417 bp
Thymine Count
1590349 bp
Guanine Count
873842 bp
Cytosine Count
875421 bp
Genome Length
4929029 bp
Protein-coding Genes
4085 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3098 domain-containing protein | LOK61_00805 | Not Available | Negative | 211393 - 211620 | 8288.52 |
| permease-like cell division protein ftsx | LOK61_00810 | A5FMG4 | Negative | 211620 - 212498 | 32785.6 |
| hypothetical protein | LOK61_00815 | Not Available | Positive | 212696 - 213109 | 15383.2 |
| leucine--trna ligase | LOK61_00820 | Q11VK7 | Positive | 213279 - 216065 | 106712.0 |
| dead/deah box helicase | LOK61_00825 | P25888 | Negative | 216328 - 217632 | 47972.4 |
| apc family permease | LOK61_00830 | O34739 | Negative | 217941 - 219278 | 48426.6 |
| type iia dna topoisomerase subunit b | LOK61_00835 | Q59189 | Positive | 219684 - 221552 | 70897.5 |
| yihy/virulence factor brkb family protein | LOK61_00840 | A3QIW3 | Negative | 221566 - 222591 | 37281.5 |
| bama/tama family outer membrane protein | LOK61_00845 | Q9K1H0 | Negative | 222595 - 224910 | 87084.1 |
| translocation/assembly module tamb | LOK61_00850 | Not Available | Negative | 224894 - 229888 | 182962.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

