Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter mucosus |
| Strain | Q8-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1589417 bp
Thymine Count
1590349 bp
Guanine Count
873842 bp
Cytosine Count
875421 bp
Genome Length
4929029 bp
Protein-coding Genes
4085 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | LOK61_00505 | Not Available | Positive | 143865 - 144374 | 19028.3 |
| alpha-ketoglutarate-dependent dioxygenase alkb | LOK61_00510 | Q5UR03 | Positive | 144525 - 145160 | 24634.8 |
| cupin domain-containing protein | LOK61_00515 | Q0QFQ2 | Negative | 145212 - 145682 | 17056.5 |
| carboxymuconolactone decarboxylase family protein | LOK61_00520 | P29911 | Negative | 145747 - 146451 | 25505.4 |
| flavodoxin | LOK61_00525 | Not Available | Negative | 146496 - 147122 | 23058.2 |
| cupin domain-containing protein | LOK61_00530 | Not Available | Negative | 147378 - 147833 | 16657.1 |
| aldo/keto reductase | LOK61_00535 | O22707 | Negative | 147856 - 148839 | 36186.2 |
| aldo/keto reductase | LOK61_00540 | O32210 | Negative | 148858 - 149706 | 32452.7 |
| helix-turn-helix domain-containing protein | LOK61_00545 | O32071 | Positive | 149869 - 150765 | 34731.2 |
| nuclear transport factor 2 family protein | LOK61_00550 | Not Available | Positive | 150820 - 151293 | 17362.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

