Pseudonocardia sp. Q2

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia sp. Q2 is characterized by its rod-shaped morphology. This bacterium possesses two replicons, indicating a complex genome structure typical of certain actinobacteria. The genomic data for Pseudonocardia sp. Q2 can be accessed through the following accession numbers: CP080521.1 and CP080522.1. The presence of multiple replicons may suggest a potential for greater genetic diversity and adaptability, which can be advantageous in various environmental conditions. Pseudonocardia species are known to inhabit diverse ecosystems, often associated with soil and plant material. Their ecological role may include interactions with other microorganisms, contributing to nutrient cycling and the decomposition of organic matter. In summary, the rod-shaped Pseudonocardia sp. Q2, with its two replicons, highlights the complexity and adaptability of its genomic architecture, suggesting its potential importance in ecological contexts such as soil health and microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia sp. DSM 110487
StrainQ2

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia sp. Q2, Complete Genome

Gene Summary

Adenine Count

1426887 bp

Thymine Count

1428897 bp

Guanine Count

3638870 bp

Cytosine Count

3638055 bp

Genome Length

10132709 bp

Protein-coding Genes

9421 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseK1T35_30300P0A5L5Negative6497064 - 649847347108.3
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseK1T35_30305A0QF47Negative6498526 - 649999549916.6
penicillin-binding protein 2K1T35_30310A0R022Negative6500342 - 650219865496.8
hypothetical proteinK1T35_30315Not AvailableNegative6502198 - 650306729315.9
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhK1T35_30320A4FLX5Negative6503099 - 650407935033.1
division/cell wall cluster transcriptional repressor mrazK1T35_30325A4FLX6Negative6504253 - 650468416190.1
moxr family atpaseK1T35_30330P94474Positive6505115 - 650611335383.8
duf58 domain-containing proteinK1T35_30335Not AvailablePositive6506116 - 650736043164.9
duf3488 and transglutaminase-like domain-containing proteinK1T35_30340P94476Positive6507432 - 650974479659.8
duf3040 domain-containing proteinK1T35_30345Not AvailableNegative6509831 - 651021114047.3

Displaying genes 6061 – 6070 of 9722 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.