Geobacter benzoatilyticus Jerry-YX

Gram-negative

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Geobacter

Description

**Geobacter benzoatilyticus Jerry-YX** is a Gram-negative bacterium characterized by the presence of flagella, which suggests the capability for motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of G. benzoatilyticus is cataloged under the accession number CP071382.1. As a member of the Geobacter genus, G. benzoatilyticus is likely involved in biogeochemical processes, particularly in the degradation of aromatic compounds such as benzoate. This trait highlights its potential role in environmental bioremediation, where such microorganisms can facilitate the breakdown of pollutants. Additionally, the presence of flagella may enhance its ability to navigate toward favorable ecological niches, promoting its survival and interaction with other microorganisms in its habitat. The insights gained from studying G. benzoatilyticus can contribute to a better understanding of microbial communities and their functionalities in natural and engineered ecosystems. By harnessing the metabolic capabilities of this organism, there is potential for developing biotechnological applications, particularly in the context of waste treatment and environmental cleanup strategies.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusGeobacter
SpeciesGeobacter benzoatilyticus
StrainJerry-YX

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geobacter benzoatilyticus Jerry-YX, Complete Genome

Gene Summary

Adenine Count

762639 bp

Thymine Count

755583 bp

Guanine Count

1028858 bp

Cytosine Count

1036618 bp

Genome Length

3583698 bp

Protein-coding Genes

3252 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobalamin-dependent proteinJZM60_02750Q60AV6Negative602498 - 60385651272.5
pyridoxamine 5'-phosphate oxidase family proteinJZM60_02755Q46604Positive604144 - 60451513382.2
duf2721 domain-containing proteinJZM60_02760Not AvailableNegative604654 - 60509416043.5
cysteine hydrolaseJZM60_02765P96654Negative605164 - 60572419906.8
duf4325 domain-containing proteinJZM60_02770Not AvailablePositive606078 - 60710339019.3
brna antitoxin family proteinJZM60_02775Not AvailableNegative607139 - 60745611664.9
brnt family toxinJZM60_02780Not AvailableNegative607461 - 60773910757.7
sbbp repeat-containing proteinJZM60_02785Q5UPU7Negative607984 - 60934547773.4
hypothetical proteinJZM60_02790Not AvailableNegative609673 - 61009815795.3
gdyxxlxy domain-containing proteinJZM60_02795Not AvailableNegative610364 - 61109827819.4

Displaying genes 591 – 600 of 3341 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.