Geobacter benzoatilyticus Jerry-YX

Gram-negative

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Geobacter

Description

**Geobacter benzoatilyticus Jerry-YX** is a Gram-negative bacterium characterized by the presence of flagella, which suggests the capability for motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of G. benzoatilyticus is cataloged under the accession number CP071382.1. As a member of the Geobacter genus, G. benzoatilyticus is likely involved in biogeochemical processes, particularly in the degradation of aromatic compounds such as benzoate. This trait highlights its potential role in environmental bioremediation, where such microorganisms can facilitate the breakdown of pollutants. Additionally, the presence of flagella may enhance its ability to navigate toward favorable ecological niches, promoting its survival and interaction with other microorganisms in its habitat. The insights gained from studying G. benzoatilyticus can contribute to a better understanding of microbial communities and their functionalities in natural and engineered ecosystems. By harnessing the metabolic capabilities of this organism, there is potential for developing biotechnological applications, particularly in the context of waste treatment and environmental cleanup strategies.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusGeobacter
SpeciesGeobacter benzoatilyticus
StrainJerry-YX

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geobacter benzoatilyticus Jerry-YX, Complete Genome

Gene Summary

Adenine Count

762639 bp

Thymine Count

755583 bp

Guanine Count

1028858 bp

Cytosine Count

1036618 bp

Genome Length

3583698 bp

Protein-coding Genes

3252 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate carbamoyltransferase catalytic subunitJZM60_14685Q39US4Negative3163258 - 316419334153.4
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrrJZM60_14690Q74DP6Negative3164244 - 316478019652.8
signal peptidase iJZM60_14695Q9I5G7Negative3164995 - 316567525742.1
elongation factor 4JZM60_14700Q39US7Negative3165705 - 316750467291.8
ribosome assembly rna-binding protein yhbyJZM60_14705P54454Positive3167710 - 316800010602.0
yxwgxw repeat-containing proteinJZM60_14710Not AvailableNegative3168095 - 316864321239.4
deoxyguanosinetriphosphate triphosphohydrolaseJZM60_14715Q39UT1Negative3168904 - 317006144573.2
class ii fructose-bisphosphate aldolaseJZM60_14720P13243Positive3170219 - 317130439718.6
16s rrna (guanine(966)-n(2))-methyltransferase rsmdJZM60_14725O34331Positive3171301 - 317187620793.0
pantetheine-phosphate adenylyltransferaseJZM60_14730Q39UT4Positive3171869 - 317236318388.2

Displaying genes 2941 – 2950 of 3341 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.