Geobacter benzoatilyticus Jerry-YX

Gram-negative

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Geobacter

Description

**Geobacter benzoatilyticus Jerry-YX** is a Gram-negative bacterium characterized by the presence of flagella, which suggests the capability for motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of G. benzoatilyticus is cataloged under the accession number CP071382.1. As a member of the Geobacter genus, G. benzoatilyticus is likely involved in biogeochemical processes, particularly in the degradation of aromatic compounds such as benzoate. This trait highlights its potential role in environmental bioremediation, where such microorganisms can facilitate the breakdown of pollutants. Additionally, the presence of flagella may enhance its ability to navigate toward favorable ecological niches, promoting its survival and interaction with other microorganisms in its habitat. The insights gained from studying G. benzoatilyticus can contribute to a better understanding of microbial communities and their functionalities in natural and engineered ecosystems. By harnessing the metabolic capabilities of this organism, there is potential for developing biotechnological applications, particularly in the context of waste treatment and environmental cleanup strategies.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusGeobacter
SpeciesGeobacter benzoatilyticus
StrainJerry-YX

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geobacter benzoatilyticus Jerry-YX, Complete Genome

Gene Summary

Adenine Count

762639 bp

Thymine Count

755583 bp

Guanine Count

1028858 bp

Cytosine Count

1036618 bp

Genome Length

3583698 bp

Protein-coding Genes

3252 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiJZM60_13285Q0AXM5Positive2879624 - 288082643909.3
6,7-dimethyl-8-ribityllumazine synthaseJZM60_13290Q39V66Positive2880850 - 288131716346.8
transcription antitermination factor nusbJZM60_13295Q39V65Positive2881317 - 288174515686.7
homoserine dehydrogenaseJZM60_13300P29365Positive2881782 - 288309246695.8
had hydrolase-like proteinJZM60_13305P64636Negative2883159 - 288382125395.6
threonine synthaseJZM60_13310P37145Negative2883848 - 288523351057.1
moxr family atpaseJZM60_13315P94474Positive2885391 - 288633233658.0
duf58 domain-containing proteinJZM60_13320Not AvailablePositive2886329 - 288719531546.6
duf3488 domain-containing transglutaminase family proteinJZM60_13325Q9HZX3Positive2887182 - 288909870766.2
tetratricopeptide repeat proteinJZM60_13330Not AvailablePositive2889228 - 289121672990.3

Displaying genes 2661 – 2670 of 3341 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.