Geobacter benzoatilyticus Jerry-YX

Gram-negative

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Geobacter

Description

**Geobacter benzoatilyticus Jerry-YX** is a Gram-negative bacterium characterized by the presence of flagella, which suggests the capability for motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of G. benzoatilyticus is cataloged under the accession number CP071382.1. As a member of the Geobacter genus, G. benzoatilyticus is likely involved in biogeochemical processes, particularly in the degradation of aromatic compounds such as benzoate. This trait highlights its potential role in environmental bioremediation, where such microorganisms can facilitate the breakdown of pollutants. Additionally, the presence of flagella may enhance its ability to navigate toward favorable ecological niches, promoting its survival and interaction with other microorganisms in its habitat. The insights gained from studying G. benzoatilyticus can contribute to a better understanding of microbial communities and their functionalities in natural and engineered ecosystems. By harnessing the metabolic capabilities of this organism, there is potential for developing biotechnological applications, particularly in the context of waste treatment and environmental cleanup strategies.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusGeobacter
SpeciesGeobacter benzoatilyticus
StrainJerry-YX

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geobacter benzoatilyticus Jerry-YX, Complete Genome

Gene Summary

Adenine Count

762639 bp

Thymine Count

755583 bp

Guanine Count

1028858 bp

Cytosine Count

1036618 bp

Genome Length

3583698 bp

Protein-coding Genes

3252 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii 3-dehydroquinate dehydrataseJZM60_10915Q39X01Positive2341235 - 234168715954.4
aminopeptidase p family proteinJZM60_10920P54518Positive2341691 - 234276138292.7
acetyl-coa carboxylase biotin carboxyl carrier proteinJZM60_10925P0ABE0Positive2342862 - 234333816895.7
acetyl-coa carboxylase biotin carboxylase subunitJZM60_10930Q58626Positive2343415 - 234475548938.3
glycine cleavage system protein gcvhJZM60_10935Q49W45Positive2344759 - 234515714640.7
menaquinone biosynthesis proteinJZM60_10940Q9L0T8Positive2345252 - 234608830662.1
eal domain-containing proteinJZM60_10945Q9I310Positive2346107 - 234848889047.8
nudix hydrolaseJZM60_10950Q58549Negative2348485 - 234894316664.8
pxxkw family cysteine-rich proteinJZM60_10955Not AvailableNegative2349006 - 234929910299.5
phosphoglucomutase/phosphomannomutase family proteinJZM60_10960P38569Positive2349590 - 235100851428.9

Displaying genes 2211 – 2220 of 3341 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.