Rhodococcus pseudokoreensis R 79, R79

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus pseudokoreensis R79 is a notable bacterial species characterized by the presence of flagella, which suggests motility and the ability to navigate its environment. This trait can be advantageous for survival and colonization in various ecological niches. Genomically, R79 is represented by a total of six replicons, indicating a complex genetic architecture. The presence of multiple replicons can facilitate genetic diversity and adaptability, which may play a role in the organism's ability to thrive in diverse conditions. The bacterial genome is accessible through several genetic sequence accessions, including CP070614.1, CP070615.1, CP070616.1, CP070617.1, CP070618.1, and CP070619.1, providing a comprehensive resource for further genomic studies. The combination of flagellar motility and a complex genetic structure may allow Rhodococcus pseudokoreensis R79 to occupy specialized ecological roles, potentially involving the degradation of pollutants or organic matter. This suggests that R79 may contribute to bioremediation processes or play a role in nutrient cycling within its environment. Overall, the traits of R79 highlight its potential significance within microbial ecosystems and its adaptability to various ecological challenges.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus pseudokoreensis
StrainR 79, R79

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus pseudokoreensis R 79, R79, Complete Genome

Gene Summary

Adenine Count

1422584 bp

Thymine Count

1411055 bp

Guanine Count

2944451 bp

Cytosine Count

2952684 bp

Genome Length

8730774 bp

Protein-coding Genes

7854 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid permeaseJWS13_32895P46349Negative6075998 - 607741650171.0
shikimate transporterJWS13_32900P76350Positive6077697 - 607905248237.1
shikimate dehydrogenaseJWS13_32905Q82M83Positive6079078 - 607995630700.7
helix-turn-helix domain-containing proteinJWS13_32910Q52154Negative6079961 - 608074028162.7
duf2252 domain-containing proteinJWS13_32915Not AvailableNegative6080783 - 608218351557.4
pqq-dependent sugar dehydrogenaseJWS13_32920P75804Positive6082346 - 608342236895.7
hypothetical proteinJWS13_32925Not AvailableNegative6083462 - 608378812269.5
fused mfs/spermidine synthaseJWS13_32930Q7MF74Positive6083909 - 608476030451.2
gntp family permeaseJWS13_32935Q46892Negative6084757 - 608614547750.4
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseJWS13_32940O83578Negative6086175 - 608680421212.4

Displaying genes 5561 – 5570 of 9029 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.