Rhodococcus pseudokoreensis R 79, R79

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus pseudokoreensis R79 is a notable bacterial species characterized by the presence of flagella, which suggests motility and the ability to navigate its environment. This trait can be advantageous for survival and colonization in various ecological niches. Genomically, R79 is represented by a total of six replicons, indicating a complex genetic architecture. The presence of multiple replicons can facilitate genetic diversity and adaptability, which may play a role in the organism's ability to thrive in diverse conditions. The bacterial genome is accessible through several genetic sequence accessions, including CP070614.1, CP070615.1, CP070616.1, CP070617.1, CP070618.1, and CP070619.1, providing a comprehensive resource for further genomic studies. The combination of flagellar motility and a complex genetic structure may allow Rhodococcus pseudokoreensis R79 to occupy specialized ecological roles, potentially involving the degradation of pollutants or organic matter. This suggests that R79 may contribute to bioremediation processes or play a role in nutrient cycling within its environment. Overall, the traits of R79 highlight its potential significance within microbial ecosystems and its adaptability to various ecological challenges.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus pseudokoreensis
StrainR 79, R79

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus pseudokoreensis R 79, R79, Complete Genome

Gene Summary

Adenine Count

1422584 bp

Thymine Count

1411055 bp

Guanine Count

2944451 bp

Cytosine Count

2952684 bp

Genome Length

8730774 bp

Protein-coding Genes

7854 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amp-binding proteinJWS13_30545O31826Negative5548006 - 554965559728.5
sdr family oxidoreductaseJWS13_30550P39071Negative5549833 - 555063327564.2
benzoyl-coa reductaseJWS13_30555G3KIM5Negative5550630 - 555156231744.6
2-hydroxyacyl-coa dehydrataseJWS13_30560Q5U924Negative5551608 - 555294850149.5
2-hydroxyacyl-coa dehydrataseJWS13_30565Q5U923Negative5552977 - 555414943550.9
coa transferaseJWS13_30570O06543Positive5554311 - 555541739382.7
phenylacetic acid degradation protein paaxJWS13_30575P76086Positive5555467 - 555633632127.1
hypothetical proteinJWS13_30580Not AvailableNegative5556362 - 55566169747.84
aldehyde dehydrogenaseJWS13_30585H1ZV37Negative5556688 - 555812450373.4
nad(p)-dependent alcohol dehydrogenaseJWS13_30590P39849Negative5558164 - 555927037900.6

Displaying genes 5091 – 5100 of 9029 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.