Rhodococcus pseudokoreensis R 79, R79

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus pseudokoreensis R79 is a notable bacterial species characterized by the presence of flagella, which suggests motility and the ability to navigate its environment. This trait can be advantageous for survival and colonization in various ecological niches. Genomically, R79 is represented by a total of six replicons, indicating a complex genetic architecture. The presence of multiple replicons can facilitate genetic diversity and adaptability, which may play a role in the organism's ability to thrive in diverse conditions. The bacterial genome is accessible through several genetic sequence accessions, including CP070614.1, CP070615.1, CP070616.1, CP070617.1, CP070618.1, and CP070619.1, providing a comprehensive resource for further genomic studies. The combination of flagellar motility and a complex genetic structure may allow Rhodococcus pseudokoreensis R79 to occupy specialized ecological roles, potentially involving the degradation of pollutants or organic matter. This suggests that R79 may contribute to bioremediation processes or play a role in nutrient cycling within its environment. Overall, the traits of R79 highlight its potential significance within microbial ecosystems and its adaptability to various ecological challenges.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus pseudokoreensis
StrainR 79, R79

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus pseudokoreensis R 79, R79, Complete Genome

Gene Summary

Adenine Count

1422584 bp

Thymine Count

1411055 bp

Guanine Count

2944451 bp

Cytosine Count

2952684 bp

Genome Length

8730774 bp

Protein-coding Genes

7854 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional aldolase/short-chain dehydrogenaseJWS13_22595P40747Negative3817831 - 381987071743.0
l-fucose/l-arabinose isomerase family proteinJWS13_22600A1SDP0Negative3819900 - 382134551828.5
l-rhamnose isomeraseJWS13_22605Q92S14Negative3821345 - 382252643089.6
l-rhamnose mutarotaseJWS13_22610Q8ESX3Negative3822533 - 382289513857.3
rhamnose abc transporter substrate-binding proteinJWS13_22615A9MZG4Negative3822905 - 382398137415.7
abc transporter permeaseJWS13_22620P44736Negative3824051 - 382510036107.7
abc transporter permeaseJWS13_22625A4WER3Negative3825090 - 382614535343.0
sugar abc transporter atp-binding proteinJWS13_22630Q0S9A4Negative3826142 - 382765353489.7
laci family dna-binding transcriptional regulatorJWS13_22635Q6LQB9Positive3827960 - 382897936322.4
tigr03618 family f420-dependent ppox class oxidoreductaseJWS13_22640Not AvailablePositive3829040 - 382944715407.2

Displaying genes 3501 – 3510 of 9029 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.