Rhodococcus pseudokoreensis R 79, R79

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus pseudokoreensis R79 is a notable bacterial species characterized by the presence of flagella, which suggests motility and the ability to navigate its environment. This trait can be advantageous for survival and colonization in various ecological niches. Genomically, R79 is represented by a total of six replicons, indicating a complex genetic architecture. The presence of multiple replicons can facilitate genetic diversity and adaptability, which may play a role in the organism's ability to thrive in diverse conditions. The bacterial genome is accessible through several genetic sequence accessions, including CP070614.1, CP070615.1, CP070616.1, CP070617.1, CP070618.1, and CP070619.1, providing a comprehensive resource for further genomic studies. The combination of flagellar motility and a complex genetic structure may allow Rhodococcus pseudokoreensis R79 to occupy specialized ecological roles, potentially involving the degradation of pollutants or organic matter. This suggests that R79 may contribute to bioremediation processes or play a role in nutrient cycling within its environment. Overall, the traits of R79 highlight its potential significance within microbial ecosystems and its adaptability to various ecological challenges.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus pseudokoreensis
StrainR 79, R79

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus pseudokoreensis R 79, R79, Complete Genome

Gene Summary

Adenine Count

1422584 bp

Thymine Count

1411055 bp

Guanine Count

2944451 bp

Cytosine Count

2952684 bp

Genome Length

8730774 bp

Protein-coding Genes

7854 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coa-acylating methylmalonate-semialdehyde dehydrogenaseJWS13_20795Q9I702Negative3435654 - 343713851946.5
pucr family transcriptional regulator ligand-binding domain-containing proteinJWS13_20800O32138Positive3437338 - 343894557693.4
alanine dehydrogenaseJWS13_20805A0QVQ8Positive3439159 - 344026538395.1
zip family metal transporterJWS13_20810Not AvailableNegative3440272 - 344096122968.3
biotin-dependent carboxyltransferase family proteinJWS13_20815P75745Positive3441009 - 344189030831.5
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbJWS13_20820A1TG08Negative3441921 - 344288933514.0
cysteine--trna ligaseJWS13_20825C1BAC4Negative3442892 - 344428651513.4
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseJWS13_20830C1BAC3Negative3444298 - 344477416175.3
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseJWS13_20835C1BAC2Negative3444774 - 344545423272.1
rna polymerase-binding transcription factor cardJWS13_20840A0R561Negative3445473 - 344596117894.3

Displaying genes 3141 – 3150 of 9029 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.