Rhodococcus pseudokoreensis R 79, R79

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus pseudokoreensis R79 is a notable bacterial species characterized by the presence of flagella, which suggests motility and the ability to navigate its environment. This trait can be advantageous for survival and colonization in various ecological niches. Genomically, R79 is represented by a total of six replicons, indicating a complex genetic architecture. The presence of multiple replicons can facilitate genetic diversity and adaptability, which may play a role in the organism's ability to thrive in diverse conditions. The bacterial genome is accessible through several genetic sequence accessions, including CP070614.1, CP070615.1, CP070616.1, CP070617.1, CP070618.1, and CP070619.1, providing a comprehensive resource for further genomic studies. The combination of flagellar motility and a complex genetic structure may allow Rhodococcus pseudokoreensis R79 to occupy specialized ecological roles, potentially involving the degradation of pollutants or organic matter. This suggests that R79 may contribute to bioremediation processes or play a role in nutrient cycling within its environment. Overall, the traits of R79 highlight its potential significance within microbial ecosystems and its adaptability to various ecological challenges.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus pseudokoreensis
StrainR 79, R79

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus pseudokoreensis R 79, R79, Complete Genome

Gene Summary

Adenine Count

1422584 bp

Thymine Count

1411055 bp

Guanine Count

2944451 bp

Cytosine Count

2952684 bp

Genome Length

8730774 bp

Protein-coding Genes

7854 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
vwa domain-containing proteinJWS13_11395P9WLQ8Negative1291684 - 129333056008.9
helix-turn-helix domain-containing proteinJWS13_11400P94536Negative1293476 - 129471444473.4
nadp-dependent oxidoreductaseJWS13_11405P76113Negative1294861 - 129590136806.7
acyl-coa synthetaseJWS13_11410M4IS90Negative1295954 - 129735449101.0
rhomboid family intramembrane serine proteaseJWS13_11415Not AvailableNegative1297367 - 129804123062.6
proline dehydrogenase family proteinJWS13_11420Q9RW55Negative1298097 - 129907435215.0
l-glutamate gamma-semialdehyde dehydrogenaseJWS13_11425Q54RA2Negative1299071 - 130071158616.9
hypothetical proteinJWS13_11430Not AvailablePositive1300871 - 130146421716.6
ppox class f420-dependent oxidoreductaseJWS13_11435L8EYU3Negative1301469 - 130188214965.6
hypothetical proteinJWS13_11440Not AvailableNegative1301936 - 130280531386.6

Displaying genes 1261 – 1270 of 9029 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.