Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cofh family radical sam protein | IZT61_00410 | Q9K864 | Negative | 85932 - 87056 | 42066.5 |
| insulinase family protein | IZT61_00415 | O25656 | Positive | 87372 - 88616 | 47364.3 |
| insulinase family protein | IZT61_00420 | Q04805 | Positive | 88609 - 89880 | 48526.5 |
| hypothetical protein | IZT61_00425 | Not Available | Negative | 90353 - 90832 | 18204.5 |
| hypothetical protein | IZT61_00430 | Not Available | Negative | 90823 - 91284 | 17077.5 |
| duf3857 domain-containing protein | IZT61_00435 | Not Available | Negative | 91550 - 93445 | 71583.3 |
| duf3857 domain-containing protein | IZT61_00440 | Not Available | Negative | 93442 - 95448 | 77089.1 |
| imp dehydrogenase | IZT61_00445 | Q9KGN8 | Positive | 95826 - 97295 | 52343.6 |
| tonb-dependent receptor | IZT61_00450 | A1JTG3 | Positive | 98740 - 101319 | 93323.1 |
| tigr00730 family rossman fold protein | IZT61_00455 | P48636 | Positive | 101484 - 102077 | 21848.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

