Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfatase-like hydrolase/transferase | IZT61_21665 | Q8XNV1 | Negative | 5309878 - 5311356 | 55526.7 |
| hypothetical protein | IZT61_21670 | Not Available | Negative | 5311965 - 5312492 | 20237.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | IZT61_21675 | A6H1H2 | Negative | 5312492 - 5314012 | 55457.5 |
| duf4783 domain-containing protein | IZT61_21680 | Not Available | Positive | 5314186 - 5314584 | 15133.2 |
| carboxylating nicotinate-nucleotide diphosphorylase | IZT61_21685 | P77938 | Positive | 5315272 - 5316114 | 30291.8 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | IZT61_21690 | Q834K7 | Positive | 5316164 - 5316811 | 23197.1 |
| m48 family metallopeptidase | IZT61_21695 | Q9P7G4 | Positive | 5316900 - 5317703 | 28825.5 |
| chorismate-binding protein | IZT61_21700 | P05041 | Negative | 5317996 - 5319252 | 47562.4 |
| type ii toxin-antitoxin system rele/pare family toxin | IZT61_21705 | Not Available | Negative | 5319813 - 5320115 | 12022.4 |
| hypothetical protein | IZT61_21710 | Not Available | Negative | 5320112 - 5320339 | 8662.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

