Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_01660 | Not Available | Positive | 381492 - 381659 | 6289.54 |
| malto-oligosyltrehalose trehalohydrolase | IZT61_01665 | Q55088 | Positive | 381786 - 383654 | 70616.8 |
| malto-oligosyltrehalose synthase | IZT61_01670 | P72785 | Positive | 383647 - 387696 | 154313.0 |
| duf3606 domain-containing protein | IZT61_01675 | Not Available | Negative | 387725 - 387922 | 7389.77 |
| pas domain s-box protein | IZT61_01680 | Q45614 | Negative | 388539 - 390275 | 65437.3 |
| hypothetical protein | IZT61_01685 | Not Available | Negative | 390765 - 391910 | 43278.3 |
| tetratricopeptide repeat protein | IZT61_01690 | Not Available | Negative | 392003 - 393091 | 40027.9 |
| dna gyrase subunit a | IZT61_01695 | P0C0R0 | Negative | 393117 - 395705 | 96983.1 |
| mfs transporter | IZT61_01700 | A8AQB4 | Negative | 396428 - 397660 | 44352.2 |
| coproporphyrinogen iii oxidase | IZT61_01705 | Not Available | Negative | 397764 - 397979 | 7377.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

