Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing histidine kinase | IZT61_12805 | Q1RJB3 | Positive | 3168424 - 3172155 | 142529.0 |
| hypothetical protein | IZT61_12810 | Not Available | Negative | 3172515 - 3173417 | 34205.8 |
| family 10 glycosylhydrolase | IZT61_12815 | O35015 | Positive | 3173621 - 3175165 | 58730.3 |
| duf5009 domain-containing protein | IZT61_12820 | Q3UDW8 | Positive | 3175762 - 3176922 | 42838.6 |
| exodeoxyribonuclease iii | IZT61_12825 | O26314 | Positive | 3177046 - 3177813 | 29574.3 |
| hypothetical protein | IZT61_12830 | Not Available | Negative | 3177867 - 3178025 | 6112.28 |
| 5-formyltetrahydrofolate cyclo-ligase | IZT61_12835 | Q89AD6 | Negative | 3178038 - 3178598 | 21209.6 |
| elongation factor p | IZT61_12840 | B8FQ76 | Negative | 3179045 - 3179605 | 20935.7 |
| elongation factor p | IZT61_12845 | Q3ATP1 | Negative | 3179724 - 3180284 | 21223.2 |
| abc transporter atp-binding protein | IZT61_12850 | P0C0E3 | Negative | 3180748 - 3181362 | 22865.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

