Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyl transferase abieii/abigii toxin family protein | IZT61_12300 | Not Available | Negative | 3038428 - 3039453 | 39444.9 |
| hypothetical protein | IZT61_12305 | Not Available | Negative | 3039450 - 3040043 | 22196.6 |
| site-specific integrase | IZT61_12310 | Q71Y59 | Negative | 3040689 - 3041960 | 49506.2 |
| Trna-arg | Not Available | Not Available | Positive | 3042273 - 3042344 | Not Available |
| hypothetical protein | IZT61_12320 | Not Available | Positive | 3042676 - 3043551 | 33946.1 |
| hypothetical protein | IZT61_12325 | Not Available | Positive | 3043640 - 3044029 | 14770.6 |
| dead/deah box helicase family protein | IZT61_12330 | Not Available | Positive | 3044127 - 3045962 | 71328.2 |
| hypothetical protein | IZT61_12335 | Not Available | Positive | 3046658 - 3047152 | 20083.0 |
| hypothetical protein | IZT61_12340 | Not Available | Positive | 3047344 - 3047856 | 19614.2 |
| hypothetical protein | IZT61_12345 | Not Available | Positive | 3048160 - 3048537 | 14311.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

