Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_12200 | Not Available | Negative | 3013105 - 3013515 | 15684.7 |
| tlpa family protein disulfide reductase | IZT61_12205 | O31820 | Positive | 3014450 - 3015184 | 27289.6 |
| susc/raga family tonb-linked outer membrane protein | IZT61_12210 | T2KMI3 | Positive | 3015181 - 3018432 | 119748.0 |
| ragb/susd family nutrient uptake outer membrane protein | IZT61_12215 | T2KPM5 | Positive | 3018440 - 3019834 | 52320.9 |
| hypothetical protein | IZT61_12220 | Not Available | Negative | 3019944 - 3020279 | 11989.0 |
| hypothetical protein | IZT61_12225 | Not Available | Negative | 3020377 - 3020727 | 13413.1 |
| crp/fnr family transcriptional regulator | IZT61_12230 | Not Available | Negative | 3021067 - 3021606 | 20872.5 |
| hypothetical protein | IZT61_12235 | Not Available | Positive | 3022575 - 3022718 | 5303.36 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobb | IZT61_12240 | Not Available | Negative | 3022750 - 3023691 | 36255.7 |
| hypothetical protein | IZT61_12245 | Not Available | Negative | 3023710 - 3024282 | 22080.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

