Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | IZT61_12100 | T2KPJ3 | Negative | 2977982 - 2981083 | 115086.0 |
| response regulator | IZT61_12105 | T2KMF4 | Positive | 2981708 - 2985610 | 147445.0 |
| hypothetical protein | IZT61_12110 | Not Available | Negative | 2986553 - 2988298 | 66708.4 |
| hypothetical protein | IZT61_12115 | Not Available | Positive | 2988690 - 2989076 | 14614.5 |
| hypothetical protein | IZT61_12120 | Not Available | Positive | 2989320 - 2991701 | 92000.3 |
| hypothetical protein | IZT61_12125 | Not Available | Positive | 2991679 - 2992683 | 39267.5 |
| hypothetical protein | IZT61_12130 | Not Available | Positive | 2992878 - 2994266 | 53648.1 |
| phospholipase d family protein | IZT61_12135 | Not Available | Positive | 2994558 - 2995817 | 49282.7 |
| hypothetical protein | IZT61_12140 | Not Available | Positive | 2996013 - 2996363 | 13508.5 |
| dna (cytosine-5-)-methyltransferase | IZT61_12145 | P00476 | Positive | 2997114 - 2998352 | 47404.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

