Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| qace | IZT61_12050 | Not Available | Positive | 2969904 - 2970284 | 13931.2 |
| hypothetical protein | IZT61_12055 | Not Available | Positive | 2970312 - 2970695 | 14818.1 |
| beta-carotene 15,15'-monooxygenase | IZT61_12060 | Not Available | Positive | 2970878 - 2972206 | 51334.3 |
| hypothetical protein | IZT61_12065 | Not Available | Positive | 2972223 - 2973104 | 33912.2 |
| hypothetical protein | IZT61_12070 | Not Available | Positive | 2973134 - 2973349 | 8020.88 |
| thermonuclease family protein | IZT61_12075 | Q57519 | Positive | 2973331 - 2973870 | 20834.3 |
| hypothetical protein | IZT61_12080 | Not Available | Positive | 2974145 - 2974393 | 9040.51 |
| helix-turn-helix transcriptional regulator | IZT61_12085 | Not Available | Positive | 2974559 - 2974807 | 9159.04 |
| hypothetical protein | IZT61_12090 | Not Available | Negative | 2975328 - 2976353 | 38002.9 |
| ragb/susd family nutrient uptake outer membrane protein | IZT61_12095 | T2KNB8 | Negative | 2976368 - 2977975 | 60481.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

