Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail protein | IZT61_12000 | Not Available | Negative | 2960412 - 2960984 | 19460.2 |
| hypothetical protein | IZT61_12005 | Q9KQ30 | Negative | 2961004 - 2961960 | 34846.8 |
| adenylyl-sulfate kinase | IZT61_12010 | B0CAX3 | Negative | 2962194 - 2962718 | 19776.0 |
| hypothetical protein | IZT61_12015 | Not Available | Negative | 2962711 - 2963664 | 37161.0 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | IZT61_12020 | Q989T9 | Negative | 2963661 - 2964344 | 26131.7 |
| hypothetical protein | IZT61_12025 | Not Available | Negative | 2964464 - 2965459 | 37751.4 |
| hypothetical protein | IZT61_12030 | Not Available | Positive | 2965834 - 2966040 | 6883.61 |
| tetratricopeptide repeat protein | IZT61_12035 | Not Available | Positive | 2966206 - 2967831 | 62558.6 |
| response regulator transcription factor | IZT61_12040 | Q1M7A0 | Positive | 2967839 - 2968504 | 24992.2 |
| type i restriction enzyme hsdr n-terminal domain-containing protein | IZT61_12045 | Not Available | Positive | 2968692 - 2969756 | 40812.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

