Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sura n-terminal domain-containing protein | IZT61_11850 | Q8R760 | Negative | 2919400 - 2921487 | 75054.6 |
| hypothetical protein | IZT61_11855 | Not Available | Negative | 2921798 - 2922370 | 21181.2 |
| hypothetical protein | IZT61_11860 | Not Available | Negative | 2922370 - 2923686 | 48407.2 |
| type iii pantothenate kinase | IZT61_11865 | Q89ZL1 | Negative | 2923667 - 2924401 | 26714.2 |
| beta-carotene 15,15'-monooxygenase | IZT61_11870 | Not Available | Negative | 2924529 - 2925509 | 38156.1 |
| tlpa family protein disulfide reductase | IZT61_11875 | Q63DQ8 | Negative | 2925581 - 2926150 | 21356.2 |
| hypothetical protein | IZT61_11880 | Not Available | Positive | 2926739 - 2927071 | 12545.6 |
| tonb-dependent receptor | IZT61_11885 | Q9JZN9 | Positive | 2927300 - 2929618 | 85162.8 |
| nadph dehydrogenase nama | IZT61_11890 | Q928C2 | Negative | 2930417 - 2931496 | 39719.1 |
| aldo/keto reductase | IZT61_11895 | P80874 | Negative | 2931572 - 2932561 | 36974.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

