Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybab/ebfc family nucleoid-associated protein | IZT61_11400 | A0M2C1 | Negative | 2810233 - 2810538 | 10895.1 |
| serine hydrolase | IZT61_11405 | P32959 | Negative | 2811050 - 2812279 | 46943.3 |
| hypothetical protein | IZT61_11410 | O34612 | Negative | 2812348 - 2812899 | 20568.0 |
| yccf domain-containing protein | IZT61_11415 | P0AB12 | Positive | 2813460 - 2813828 | 13425.1 |
| duf2183 domain-containing protein | IZT61_11420 | Q9HGP1 | Negative | 2813889 - 2814863 | 37376.7 |
| yegs/rv2252/bmru family lipid kinase | IZT61_11425 | Q1QUK4 | Positive | 2814923 - 2815780 | 31397.4 |
| hypothetical protein | IZT61_11430 | Not Available | Negative | 2815777 - 2816163 | 15038.9 |
| tonb family protein | IZT61_11435 | Not Available | Negative | 2816163 - 2816816 | 24119.0 |
| peptidoglycan dd-metalloendopeptidase family protein | IZT61_11440 | Not Available | Negative | 2817243 - 2817920 | 24945.1 |
| hemolysin iii family protein | IZT61_11445 | P54176 | Negative | 2817929 - 2818558 | 23925.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

