Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_11250 | Not Available | Positive | 2781860 - 2782129 | 10355.3 |
| duf4160 domain-containing protein | IZT61_11255 | Not Available | Positive | 2782192 - 2782425 | 9025.89 |
| duf2442 domain-containing protein | IZT61_11260 | Not Available | Positive | 2782415 - 2782654 | 9301.9 |
| dehydrogenase | IZT61_11265 | Q9SAV3 | Positive | 2782675 - 2784651 | 73451.0 |
| adenine deaminase | IZT61_11270 | A6GYI0 | Positive | 2784755 - 2786380 | 58983.9 |
| sprt-like domain-containing protein | IZT61_11275 | Not Available | Negative | 2786717 - 2787325 | 23998.9 |
| vwa domain-containing protein | IZT61_11280 | P9WKN0 | Positive | 2787582 - 2788679 | 41551.5 |
| duf3861 domain-containing protein | IZT61_11285 | Not Available | Positive | 2788771 - 2789064 | 11215.5 |
| sigma 54-interacting transcriptional regulator | IZT61_11290 | Not Available | Positive | 2789212 - 2790696 | 55969.9 |
| metallophosphoesterase | IZT61_11295 | Q08BG1 | Positive | 2790784 - 2792025 | 47101.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

