Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketoacyl-acp synthase iii | IZT61_11200 | A6LEP7 | Positive | 2771374 - 2772372 | 35945.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | IZT61_11205 | P49786 | Positive | 2772504 - 2772980 | 17124.7 |
| acetyl-coa carboxylase biotin carboxylase subunit | IZT61_11210 | P49787 | Positive | 2773078 - 2774421 | 49618.3 |
| hypothetical protein | IZT61_11215 | Not Available | Positive | 2774550 - 2775782 | 45595.6 |
| hypothetical protein | IZT61_11220 | Not Available | Positive | 2775833 - 2776036 | 7788.43 |
| dmt family transporter | IZT61_11225 | P0CJ64 | Positive | 2776027 - 2776297 | 9943.16 |
| twin-arginine translocase subunit tatc | IZT61_11230 | D0J948 | Positive | 2776413 - 2777294 | 33085.3 |
| ribose 5-phosphate isomerase b | IZT61_11235 | P37351 | Positive | 2777415 - 2777852 | 15975.9 |
| m28 family peptidase | IZT61_11240 | C5FNB5 | Positive | 2777882 - 2779510 | 59959.3 |
| iron-sulfur cluster-binding protein | IZT61_11245 | Q65EM0 | Positive | 2780372 - 2781757 | 52150.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

