Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four-helix bundle copper-binding protein | IZT61_11150 | O07571 | Negative | 2762010 - 2762354 | 12786.2 |
| hypothetical protein | IZT61_11155 | Not Available | Negative | 2762497 - 2763645 | 43737.1 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | IZT61_11160 | Q11UL8 | Negative | 2763670 - 2764455 | 30062.4 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | IZT61_11165 | Q89ZK3 | Positive | 2764638 - 2765717 | 39287.1 |
| mfs transporter | IZT61_11170 | Not Available | Positive | 2765833 - 2767020 | 43109.7 |
| sulfurtransferase | IZT61_11175 | Q9I452 | Positive | 2767013 - 2767855 | 30493.2 |
| beta-lactamase family protein | IZT61_11180 | P32959 | Positive | 2767862 - 2769220 | 50546.5 |
| duf177 domain-containing protein | IZT61_11185 | Not Available | Positive | 2769578 - 2770108 | 20527.4 |
| 50s ribosomal protein l32 | IZT61_11190 | A0M6N7 | Positive | 2770124 - 2770315 | 7130.64 |
| phosphate acyltransferase plsx | IZT61_11195 | Q11UM2 | Positive | 2770417 - 2771355 | 33505.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

