Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m28 family peptidase | IZT61_11000 | P25152 | Positive | 2723717 - 2724856 | 42128.6 |
| res family nad+ phosphorylase | IZT61_11005 | Q7N4H9 | Negative | 2724997 - 2725470 | 17914.5 |
| hypothetical protein | IZT61_11010 | Not Available | Negative | 2725467 - 2725895 | 16529.2 |
| class i sam-dependent methyltransferase | IZT61_11015 | Not Available | Negative | 2726379 - 2727062 | 25740.6 |
| blai/meci/copy family transcriptional regulator | IZT61_11020 | P68261 | Positive | 2727205 - 2727582 | 14735.0 |
| tonb family protein | IZT61_11025 | P18357 | Positive | 2727579 - 2729303 | 64976.8 |
| tonb-dependent receptor plug domain-containing protein | IZT61_11030 | T2KMI3 | Positive | 2729314 - 2729943 | 22589.1 |
| thiamine phosphate synthase | IZT61_11035 | A6L645 | Positive | 2729997 - 2730623 | 22628.7 |
| thiamine pyrophosphokinase | IZT61_11040 | Not Available | Positive | 2730684 - 2731244 | 21373.4 |
| gnat family n-acetyltransferase | IZT61_11045 | Q9HL57 | Positive | 2731241 - 2731735 | 18883.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

