Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | IZT61_10950 | O30156 | Negative | 2709433 - 2710581 | 41698.0 |
| n-acetyl-gamma-glutamyl-phosphate reductase | IZT61_10955 | Q8A1A7 | Negative | 2710736 - 2711755 | 36850.1 |
| argininosuccinate synthase | IZT61_10960 | Q8P8J4 | Negative | 2712019 - 2713206 | 43842.1 |
| gnat family n-acetyltransferase | IZT61_10965 | Not Available | Negative | 2713209 - 2713910 | 26677.7 |
| duf4397 domain-containing protein | IZT61_10970 | Not Available | Positive | 2714628 - 2715326 | 24857.4 |
| dmt family transporter | IZT61_10975 | P48632 | Positive | 2715480 - 2717893 | 86723.9 |
| tonb-dependent receptor | IZT61_10980 | Q9HUX3 | Positive | 2717960 - 2720350 | 87567.0 |
| duf4198 domain-containing protein | IZT61_10985 | Not Available | Positive | 2720379 - 2721089 | 26221.1 |
| pepsy domain-containing protein | IZT61_10990 | Not Available | Positive | 2721413 - 2722615 | 45723.7 |
| hypothetical protein | IZT61_10995 | Not Available | Positive | 2722636 - 2723562 | 35559.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

