Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_10900 | Not Available | Negative | 2701739 - 2701927 | 6918.47 |
| argininosuccinate lyase | IZT61_10905 | A6LI67 | Negative | 2701949 - 2703280 | 49693.9 |
| hypothetical protein | IZT61_10910 | Not Available | Negative | 2703392 - 2703613 | 8529.76 |
| hypothetical protein | IZT61_10915 | Not Available | Negative | 2703597 - 2703746 | 5467.84 |
| m20 family metallo-hydrolase | IZT61_10920 | O74916 | Negative | 2703873 - 2704937 | 39004.3 |
| pyrroline-5-carboxylate reductase | IZT61_10925 | Q54IL7 | Negative | 2705027 - 2705839 | 28118.1 |
| acetylglutamate kinase | IZT61_10930 | Q11QI8 | Negative | 2705964 - 2706788 | 29225.3 |
| duf1016 family protein | IZT61_10935 | P45423 | Negative | 2706927 - 2708024 | 42129.8 |
| acetylornithine carbamoyltransferase | IZT61_10940 | Q8A1E9 | Negative | 2708038 - 2709024 | 36580.0 |
| four helix bundle protein | IZT61_10945 | Not Available | Negative | 2709054 - 2709428 | 14323.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

