Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate kinase | IZT61_10850 | P26420 | Positive | 2690330 - 2691220 | 32271.4 |
| helix-turn-helix domain-containing protein | IZT61_10855 | Q9H611 | Negative | 2691546 - 2693816 | 86163.5 |
| hypothetical protein | IZT61_10860 | Not Available | Positive | 2694109 - 2694336 | 8237.73 |
| cpbp family intramembrane metalloprotease | IZT61_10865 | Not Available | Positive | 2694377 - 2694838 | 17534.0 |
| peptide chain release factor 3 | IZT61_10870 | A5G9T7 | Positive | 2695016 - 2696608 | 60445.9 |
| rtcb family protein | IZT61_10875 | P46850 | Positive | 2697282 - 2698706 | 51687.2 |
| hypothetical protein | IZT61_10880 | Not Available | Negative | 2698745 - 2699041 | 11283.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | IZT61_10885 | P58350 | Negative | 2699655 - 2700908 | 45391.5 |
| dmt family transporter | IZT61_10890 | Not Available | Negative | 2700919 - 2701388 | 17165.0 |
| hypothetical protein | IZT61_10895 | Q9KMA6 | Negative | 2701407 - 2701739 | 12549.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

