Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_10800 | Not Available | Positive | 2681369 - 2681587 | 8325.95 |
| putative toxin-antitoxin system toxin component, pin family | IZT61_10805 | Not Available | Positive | 2681587 - 2681994 | 15852.0 |
| radical sam family heme chaperone hemw | IZT61_10810 | P54304 | Positive | 2682112 - 2683242 | 42429.3 |
| sdr family oxidoreductase | IZT61_10815 | Q7Q732 | Positive | 2683421 - 2684203 | 28377.5 |
| fasciclin domain-containing protein | IZT61_10820 | P74615 | Positive | 2684373 - 2684924 | 19115.6 |
| cupin-like domain-containing protein | IZT61_10825 | Q1JP61 | Positive | 2685234 - 2686115 | 34525.5 |
| duf3050 domain-containing protein | IZT61_10830 | Not Available | Positive | 2686324 - 2687109 | 29853.7 |
| cupin-like domain-containing protein | IZT61_10835 | Q1JP61 | Positive | 2687303 - 2688181 | 33835.9 |
| sugar o-acetyltransferase | IZT61_10840 | P07464 | Positive | 2688727 - 2689344 | 23367.0 |
| duf4440 domain-containing protein | IZT61_10845 | Not Available | Negative | 2689819 - 2690244 | 16191.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

