Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase, lipoprotein e(p4) family | IZT61_10700 | P26093 | Negative | 2657615 - 2658379 | 29083.4 |
| hypothetical protein | IZT61_10705 | Not Available | Positive | 2658549 - 2659247 | 26283.5 |
| atp synthase f1 subunit gamma | IZT61_10710 | Q11YP0 | Negative | 2659783 - 2660676 | 32658.3 |
| f0f1 atp synthase subunit alpha | IZT61_10715 | A5FL34 | Negative | 2660755 - 2662329 | 56736.4 |
| atp synthase f1 subunit delta | IZT61_10720 | Q11YP2 | Negative | 2662538 - 2663077 | 19448.8 |
| f0f1 atp synthase subunit b | IZT61_10725 | A0M6G6 | Negative | 2663152 - 2663661 | 19192.4 |
| atp synthase f0 subunit c | IZT61_10730 | Q8A9V0 | Negative | 2663749 - 2663958 | 6458.17 |
| f0f1 atp synthase subunit a | IZT61_10735 | B3QZE8 | Negative | 2663998 - 2665131 | 41783.6 |
| hypothetical protein | IZT61_10740 | Not Available | Negative | 2665146 - 2665535 | 14673.0 |
| atpz/atpi family protein | IZT61_10745 | Not Available | Negative | 2665762 - 2665983 | 8040.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

