Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | IZT61_10550 | Not Available | Positive | 2626090 - 2626620 | 18890.7 |
| Trna-met | Not Available | Not Available | Positive | 2627106 - 2627181 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2627262 - 2627333 | Not Available |
| sulp family inorganic anion transporter | IZT61_10565 | Q55415 | Negative | 2627431 - 2629308 | 67127.9 |
| hypothetical protein | IZT61_10570 | Not Available | Negative | 2629722 - 2630303 | 22207.4 |
| cdgsh iron-sulfur domain-containing protein | IZT61_10575 | Not Available | Positive | 2630502 - 2630726 | 8133.69 |
| hypothetical protein | IZT61_10580 | Not Available | Positive | 2631133 - 2631348 | 8172.53 |
| marr family transcriptional regulator | IZT61_10585 | P9WMF0 | Positive | 2631451 - 2631885 | 16246.7 |
| mfs transporter | IZT61_10590 | Q2FW71 | Positive | 2631903 - 2633162 | 46179.3 |
| isochorismatase family protein | IZT61_10595 | P94573 | Positive | 2633167 - 2633727 | 20268.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

