Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine synthase | IZT61_10450 | P27735 | Positive | 2603988 - 2605298 | 48285.5 |
| tail fiber domain-containing protein | IZT61_10455 | Not Available | Negative | 2605404 - 2605823 | 15429.6 |
| hypothetical protein | IZT61_10460 | Not Available | Negative | 2605901 - 2606203 | 11430.7 |
| methylenetetrahydrofolate reductase | IZT61_10465 | O67422 | Negative | 2606363 - 2607316 | 35983.5 |
| methionine synthase | IZT61_10470 | Q9I2Q2 | Negative | 2607454 - 2611152 | 136791.0 |
| bax inhibitor-1/ycca family protein | IZT61_10475 | P0AAC5 | Negative | 2612021 - 2612776 | 27484.2 |
| hypothetical protein | IZT61_10480 | Not Available | Negative | 2612815 - 2613381 | 22806.6 |
| n-acetylmuramic acid 6-phosphate etherase | IZT61_10485 | A0M6M4 | Negative | 2613447 - 2614253 | 28810.3 |
| s41 family peptidase | IZT61_10490 | Q44879 | Positive | 2614442 - 2616049 | 58981.4 |
| short chain dehydrogenase | IZT61_10495 | Q49117 | Positive | 2616210 - 2616806 | 20799.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

