Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2490 domain-containing protein | IZT61_10300 | Not Available | Positive | 2572580 - 2573287 | 27592.9 |
| 2-phosphosulfolactate phosphatase | IZT61_10305 | A5IIY7 | Negative | 2573643 - 2574353 | 26067.3 |
| glycine cleavage system aminomethyltransferase gcvt | IZT61_10310 | A6GXW3 | Negative | 2574438 - 2575517 | 39527.2 |
| glycosyltransferase | IZT61_10315 | Q48455 | Negative | 2575907 - 2577109 | 46614.5 |
| ribonuclease hii | IZT61_10320 | Q5LIL2 | Negative | 2577131 - 2577739 | 22682.1 |
| tfox/sxy family protein | IZT61_10325 | Not Available | Positive | 2577818 - 2578165 | 13419.4 |
| duf4251 domain-containing protein | IZT61_10330 | Not Available | Positive | 2578242 - 2578772 | 19648.4 |
| glutaminyl-peptide cyclotransferase | IZT61_10335 | Q84WV9 | Negative | 2578935 - 2580017 | 40034.9 |
| yran family protein | IZT61_10340 | A6GVQ6 | Negative | 2579995 - 2580360 | 14241.8 |
| dna primase | IZT61_10345 | Q9KD44 | Negative | 2580624 - 2582609 | 74410.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

