Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | IZT61_10200 | O34731 | Negative | 2554413 - 2555216 | 29038.9 |
| gliding motility lipoprotein gldb | IZT61_10205 | Not Available | Negative | 2555399 - 2556433 | 40052.9 |
| port family protein | IZT61_10210 | Not Available | Positive | 2556461 - 2557141 | 24813.3 |
| nad+ synthase | IZT61_10215 | P74292 | Positive | 2557171 - 2558811 | 60880.6 |
| osmc family protein | IZT61_10220 | P0C0L2 | Negative | 2559426 - 2559842 | 14699.2 |
| signal peptidase ii | IZT61_10225 | C0ZG49 | Negative | 2559975 - 2560496 | 19779.7 |
| hypothetical protein | IZT61_10230 | Not Available | Negative | 2560501 - 2561013 | 19382.9 |
| apolipoprotein n-acyltransferase | IZT61_10235 | Q8KCC4 | Negative | 2560998 - 2562614 | 60989.1 |
| ph domain-containing protein | IZT61_10240 | O29568 | Negative | 2562958 - 2563599 | 24431.3 |
| nucleotidyltransferase domain-containing protein | IZT61_10245 | Q57592 | Negative | 2563773 - 2564075 | 11464.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

