Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | IZT61_10150 | Q7CH99 | Negative | 2541896 - 2543095 | 42980.6 |
| dihydrolipoyl dehydrogenase | IZT61_10155 | P31023 | Negative | 2543592 - 2544998 | 49945.4 |
| had family phosphatase | IZT61_10160 | Q9ZVJ5 | Negative | 2545297 - 2545965 | 25307.5 |
| esterase-like activity of phytase family protein | IZT61_10165 | Not Available | Negative | 2546057 - 2547094 | 38898.9 |
| hypothetical protein | IZT61_10170 | Not Available | Negative | 2547668 - 2548534 | 32116.7 |
| coce/nond family hydrolase | IZT61_10175 | Q9L9D7 | Positive | 2548974 - 2550842 | 71072.1 |
| m1 family metallopeptidase | IZT61_10180 | P19602 | Positive | 2551001 - 2552653 | 62905.3 |
| hypothetical protein | IZT61_10185 | Not Available | Positive | 2552795 - 2553019 | 8606.19 |
| type ii toxin-antitoxin system rele/pare family toxin | IZT61_10190 | Not Available | Positive | 2553016 - 2553321 | 12015.5 |
| duf2807 domain-containing protein | IZT61_10195 | Not Available | Positive | 2553468 - 2554196 | 24779.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

