Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | IZT61_09755 | P42982 | Negative | 2429722 - 2430864 | 42234.6 |
| hypothetical protein | IZT61_09760 | Not Available | Negative | 2431301 - 2431765 | 17523.2 |
| hypothetical protein | IZT61_09765 | Not Available | Negative | 2431905 - 2432393 | 19019.2 |
| trna lysidine(34) synthetase tils | IZT61_09770 | A6LBU3 | Negative | 2432397 - 2433725 | 50240.0 |
| lps export abc transporter periplasmic protein lptc | IZT61_09775 | Not Available | Positive | 2433791 - 2436112 | 86452.1 |
| non-canonical purine ntp diphosphatase | IZT61_09780 | A6LGA4 | Negative | 2436787 - 2437362 | 21542.5 |
| hypothetical protein | IZT61_09785 | Not Available | Negative | 2437524 - 2438177 | 24317.1 |
| hypothetical protein | IZT61_09790 | A1VYV6 | Positive | 2438273 - 2438869 | 22987.6 |
| peptidylprolyl isomerase | IZT61_09795 | Q7N8V5 | Positive | 2438908 - 2440272 | 51843.1 |
| aaa family atpase | IZT61_09800 | P94474 | Positive | 2440276 - 2441238 | 35470.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

