Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacillithiol system redox-active protein ytxj | IZT61_09455 | P39914 | Positive | 2361794 - 2362126 | 12433.7 |
| cbs domain-containing protein | IZT61_09460 | Q9LEV3 | Positive | 2363052 - 2363480 | 15958.6 |
| hypothetical protein | IZT61_09465 | Not Available | Positive | 2363490 - 2364239 | 28378.0 |
| m20/m25/m40 family metallo-hydrolase | IZT61_09470 | P25152 | Negative | 2364276 - 2365727 | 52725.3 |
| terc/alx family metal homeostasis membrane protein | IZT61_09475 | P96554 | Negative | 2366655 - 2367704 | 39857.1 |
| polyprenyl synthetase family protein | IZT61_09480 | P55785 | Negative | 2367704 - 2368675 | 36329.0 |
| alpha/beta fold hydrolase | IZT61_09485 | Not Available | Positive | 2368924 - 2369946 | 38226.5 |
| hypothetical protein | IZT61_09490 | Not Available | Positive | 2369921 - 2370475 | 20607.6 |
| ypda family putative bacillithiol disulfide reductase | IZT61_09495 | P50736 | Negative | 2370985 - 2371968 | 36452.7 |
| mbl fold metallo-hydrolase | IZT61_09500 | P54435 | Negative | 2372168 - 2373580 | 51154.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

