Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | IZT61_09355 | Q11QB0 | Negative | 2334085 - 2336199 | 77729.1 |
| 30s ribosomal protein s7 | IZT61_09360 | Q11QA9 | Negative | 2336306 - 2336773 | 17622.7 |
| 30s ribosomal protein s12 | IZT61_09365 | Q11QA8 | Negative | 2336791 - 2337204 | 15055.5 |
| hypothetical protein | IZT61_09370 | Not Available | Negative | 2337752 - 2338210 | 16589.8 |
| hypothetical protein | IZT61_09375 | Not Available | Negative | 2338477 - 2339484 | 36622.6 |
| hypothetical protein | IZT61_09380 | Not Available | Negative | 2340214 - 2341221 | 35164.5 |
| hypothetical protein | IZT61_09385 | Not Available | Negative | 2341221 - 2343446 | 77201.4 |
| hypothetical protein | IZT61_09390 | Not Available | Negative | 2343596 - 2344480 | 30478.7 |
| hypothetical protein | IZT61_09395 | Not Available | Negative | 2344537 - 2345373 | 29822.0 |
| duf2132 domain-containing protein | IZT61_09400 | Q5E7H1 | Negative | 2346034 - 2346255 | 8483.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

